BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032G07SP1|AL429626
(830 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1742 1616 0.0
>3x_Contig1742
Length = 17167
Score = 1616 bits (813), Expect = 0.0
Identities = 825/830 (99%), Gaps = 1/830 (0%)
Strand = Plus / Plus
Query: 1 ataacccctgtatatgggtaacctaacaaaatagaccttcttctatatttatatatctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1504 ataacccctgtatatgggtaacctaacaaaatagaccttcttctatatttatatatctac 1563
Query: 61 tgctaatatgctccttcaacgcccgtctcgaatattttgccatcaactggcaatggccga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1564 tgctaatatgctccttcaacgcccgtctcgaatattttgccatcaactggcaatggccga 1623
Query: 121 accctatttattgaggtcattggatcctaacttttctattttcgagaaaaaagacggctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1624 accctatttattgaggtcattggatcctaacttttctattttcgagaaaaaagacggctt 1683
Query: 181 taacagtttctatggtatctcctcttatacaaagaagcacagaattgaagaatcctcgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1684 taacagtttctatggtatctcctcttatacaaagaagcacagaattgaagaatcctcgag 1743
Query: 241 caaaagaaagagcaacttcgttatgctgtggtgactggaagtaagaacagtttgaagata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1744 caaaagaaagagcaacttcgttatgctgtggtgactggaagtaagaacagtttgaagata 1803
Query: 301 ggaagctaagatggaaagttaaaaatgcattaatatatgaggagaggtgtaagtraaggc 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1804 ggaagctaagatggaaagttaaaaatgcattaatatatgaggagaggtgtaagtaaaggc 1863
Query: 361 cgtagcttccggaggagtgaagaaccagagctttgacctgaaagtctattatacagttgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1864 cgtagcttccggaggagtgaagaaccagagctttgacctgaaagtctattatacagttgt 1923
Query: 421 cggttttctattttgactatgatatatagtacccacaagatttcttacttacgacacaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1924 cggttttctattttgactatgatatatagtacccacaagatttcttacttacgacacaat 1983
Query: 481 aagtaagcgttttcttgtttcaagttgtncaaaagtctataatttccctcaagtctcatc 540
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1984 aagtaagcgttttcttgtttcaagttgttcaaaagtctataatttccctcaagtctcatc 2043
Query: 541 aacaagccaccaaatgaatagtatactgcaagcraatccttgttacccttaacttcttcg 600
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2044 aacaagccaccaaatgaatagtatactgcaagcaaatccttgttacccttaacttcttcg 2103
Query: 601 aatttgtaggcagttccgtacatgacatagtcataatcatctgcaagagatctggttcca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2104 aatttgtaggcagttccgtacatgacatagtcataatcatctgcaagagatctggttcca 2163
Query: 661 gcaggtggtgctctccaagaggtaccctgaggttcctccgatccgtcaagttggagagaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2164 gcaggtggtgctctccaagaggtaccctgaggttcctccgatccgtcaagttggagagaa 2223
Query: 721 gttgtgatcatgactgcragttgatcttgagtctttattgggaacaattcactgttgata 780
||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2224 gttgtgatcatgactgcaagttgatcttgagtctttattggg-acaattcactgttgata 2282
Query: 781 tccaatgttaacttacaggattcttgtgaagtcgattgagcttcaatacg 830
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2283 tccaatgttaacttacaggattcttgtgaagtcgattgagcttcaatacg 2332
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6141
Number of Sequences: 1807
Number of extensions: 6141
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 830
length of database: 10,358,551
effective HSP length: 16
effective length of query: 814
effective length of database: 10,329,639
effective search space: 8408326146
effective search space used: 8408326146
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)